I personally don't like Plutonia, you have either People loving it or hating it :)
It has a lot of Ambushes and Trial and Error, so that i departs from the mixed Formula the original Games have, that also includes a good amount of Exploring, mindless Action and the Hunt for Secrets.
I made this little Picture, to show off Plutonia in a Nutshell XP
To the Main Question, i prefer Doom a lot, Quake is too brown and boring to look at.
A Trend they started with Doom 2.
Doom 1 has a good amount of diverse Textures with reds and greens.